JMP Genomics is an Affymetrix® GeneChip-compatible™ Software Solution.
JMP Genomics: Copy Number
Explore group-level or individual differences.
With multiple options for analysis and visualization of copy number data, JMP Genomics 4.1 lets you look for copy number differences between groups of samples, or compare individuals to a reference group. Segmentation analysis using faster circular binary segmentation (CBS) is also available to look for breakpoints within and across samples.
Examine variations in copy number with summary plots. JMP Genomics also allows examination of group-level differences.
JMP Genomics 4.1 makes it easy to explore copy number differences between groups or individuals:
- Visual summaries pinpoint common regions of variation across multiple samples when compared to a reference group.
- ANOVA-based methods offer statistical confidence to results, allowing examination of copy number changes or copy number and allele frequency differences simultaneously.
- Distribution analysis and principal components analysis enable users to identify potential outlier samples and assess the quatlity of raw data from copy number platforms.
- Experimental Copy Number Partition process uses CBS to look for breakpoints within and across samples.
JMP Genomics 4 Capabilities and Features
Next Steps
Request Information or Schedule a Demonstration
Call JMP Genomics Sales
877.594.6567 (US)
International Sales via Worldwide SAS Offices
Contact JMP Genomics Sales
877.594.6567 (US)
