JMP Genomics is an Affymetrix® GeneChip-compatible™ Software Solution.
JMP Genomics: Genetics
Huge data sets? No problem.
JMP Genomics 4.1 incorporates user-requested enhancements for working with large genetic marker data sets. With import and analysis routines for imputed SNP data, simplified options for simultaneous correction of association tests for population structure and relatedness, and a 64 bit edition, JMP Genomics further strengthens its offerings for the statistical geneticist. New and experienced analysts alike will appreciate how easy it is to get started with new data sets in JMP Genomics 4.1.
Benefits include:
- Support for common data formats, including Affymetrix CHP files, Illumina BeadStudio and GenomeStudio output files, and genotype text files generated by traditional microarrays or summarized from next-gen sequencing studies.
- Trusted SAS/Genetics analytics under the hood.
- Support for creation of IBD, IBS and allele-sharing genetic distance matrices for individuals and various population distance measures.
- Filtering tools, case-control association and advanced linear modeling capabilities.
- Basic Genetics Workflow, which incorporates flexible filtering and analysis in a single, easy-to-use dialog.
- Customizable genome views summarize statistical results from genetics studies to help zero in on interesting regions, with drill downs to interactive results plots and gene or SNP tracks.
- Interactive LD plots to allow interactive exploration of linkage disequilibrium across multiple SNPs within a genomic region.
- Users of both JMP Genomics and SAS Grid Manager can take advantage of experimental grid-enablement of linkage disequilibrium calculations.
JMP Genomics 4 Capabilities and Features
JMP Genomics 5.1 Release Notes
JMP Genomics Customer Successes
North Carolina State University
Next Steps
Request Information or Schedule a Demonstration
Call JMP Genomics Sales
877.594.6567 (US)
International Sales via Worldwide SAS Offices
Contact JMP Genomics Sales
877.594.6567 (US)
